Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2220 domain-containing protein | AFIC_003090 | B9IS86 | + | 3195535 - 3196704 | 42830.6 |
| hypothetical protein | AFIC_003091 | Not Available | - | 3196870 - 3197256 | 13687.5 |
| hypothetical protein | AFIC_003092 | Not Available | - | 3197253 - 3197882 | 23293.2 |
| serine/threonine-protein phosphatase | AFIC_003093 | O34779 | - | 3197884 - 3198597 | 24542.3 |
| duf4339 domain-containing protein | AFIC_003094 | Not Available | - | 3198671 - 3199252 | 21360.9 |
| helix-turn-helix transcriptional regulator | AFIC_003095 | P55409 | + | 3199421 - 3199657 | 8965.2 |
| duf2958 domain-containing protein | AFIC_003096 | Not Available | - | 3199871 - 3200212 | 12310.7 |
| hypothetical protein | AFIC_003097 | Not Available | - | 3200205 - 3201368 | 43532.5 |
| hypothetical protein | AFIC_003098 | Not Available | + | 3201688 - 3202269 | 21719.9 |
| hypothetical protein | AFIC_003099 | Not Available | + | 3202253 - 3202543 | 10926.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
