Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_003020 | Not Available | + | 3118036 - 3119166 | 41753.9 |
| duf2958 domain-containing protein | AFIC_003021 | Not Available | + | 3119168 - 3119509 | 12322.8 |
| dna cytosine methyltransferase | AFIC_003022 | P25265 | + | 3119938 - 3120990 | 39213.8 |
| hypothetical protein | AFIC_003023 | P77836 | + | 3121521 - 3122714 | 41822.2 |
| hypothetical protein | AFIC_003024 | Not Available | + | 3122884 - 3126378 | 129476.0 |
| z1 domain-containing protein | AFIC_003025 | Not Available | - | 3126399 - 3128426 | 75408.1 |
| hypothetical protein | AFIC_003026 | Not Available | - | 3128416 - 3128865 | 16448.6 |
| helix-turn-helix domain-containing protein | AFIC_003027 | P23939 | - | 3129288 - 3129497 | 8014.93 |
| hypothetical protein | AFIC_003028 | Not Available | + | 3129584 - 3130027 | 15928.3 |
| hypothetical protein | AFIC_003029 | Not Available | + | 3130219 - 3130800 | 21799.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
