Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | AFIC_002990 | P23545 | - | 3085562 - 3086863 | 47137.3 |
| hypothetical protein | AFIC_002991 | Q55979 | - | 3086892 - 3087923 | 37673.9 |
| hypothetical protein | AFIC_002992 | Not Available | - | 3088033 - 3088341 | 10990.7 |
| ompa family protein | AFIC_002993 | P65594 | - | 3088345 - 3089739 | 49548.4 |
| polysaccharide deacetylase family protein | AFIC_002994 | Not Available | + | 3089902 - 3090960 | 38957.8 |
| cytochrome ubiquinol oxidase subunit i | AFIC_002995 | P94364 | + | 3091072 - 3092382 | 48212.5 |
| cytochrome d ubiquinol oxidase subunit ii | AFIC_002996 | P0ABK4 | + | 3092472 - 3093485 | 37111.0 |
| hypothetical protein | AFIC_002997 | Not Available | + | 3093482 - 3093616 | 5147.54 |
| l,d-transpeptidase | AFIC_002998 | P39176 | + | 3093742 - 3094353 | 22453.2 |
| amino acid abc transporter substrate-binding protein | AFIC_002999 | Q52812 | + | 3094396 - 3095448 | 38773.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
