Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_002900 | Not Available | - | 2995594 - 2995785 | 6834.84 |
| Trna-thr | Not Available | Not Available | + | 2996024 - 2996098 | Not Available |
| hypothetical protein | AFIC_002902 | Not Available | - | 2996311 - 2997723 | 53374.4 |
| glycosyltransferase family 39 protein | AFIC_002903 | Q1MLH5 | + | 2998187 - 2999722 | 56081.0 |
| atp-binding protein | AFIC_002904 | Q8X524 | - | 2999887 - 3001215 | 48177.0 |
| response regulator transcription factor | AFIC_002905 | Q9HV32 | - | 3001212 - 3001868 | 24135.9 |
| hypothetical protein | AFIC_002906 | Not Available | + | 3002056 - 3002835 | 27859.3 |
| hypothetical protein | AFIC_002907 | Not Available | + | 3002873 - 3003292 | 14642.7 |
| hypothetical protein | AFIC_002908 | Not Available | + | 3003345 - 3004139 | 27834.0 |
| duf2945 domain-containing protein | AFIC_002909 | Not Available | - | 3004264 - 3004479 | 8024.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
