Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_002860 | Not Available | - | 2953152 - 2953418 | 9379.01 |
| duf6494 family protein | AFIC_002861 | Not Available | - | 2953425 - 2953631 | 7478.06 |
| propionyl-coa synthetase | AFIC_002862 | P28812 | - | 2953731 - 2955632 | 68987.0 |
| duf1850 domain-containing protein | AFIC_002863 | Not Available | - | 2955666 - 2956937 | 46299.2 |
| trap transporter permease | AFIC_002864 | P37675 | - | 2956958 - 2958985 | 72434.6 |
| taxi family trap transporter solute-binding subunit | AFIC_002865 | P0A3T3 | - | 2959232 - 2960185 | 33541.5 |
| hypothetical protein | AFIC_002866 | Not Available | + | 2960344 - 2961486 | 41267.3 |
| cytochrome c | AFIC_002867 | A4VND8 | - | 2961509 - 2962072 | 19550.3 |
| sulfite dehydrogenase | AFIC_002868 | Q8R086 | - | 2962053 - 2963345 | 46993.9 |
| cytochrome c | AFIC_002869 | A4YQU0 | - | 2963714 - 2964283 | 20109.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
