Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome ubiquinol oxidase subunit i | AFIC_002850 | P55552 | + | 2941434 - 2944277 | 104207.0 |
| yqge/algh family protein | AFIC_002851 | B6JJ36 | - | 2944444 - 2945097 | 23161.6 |
| protein-disulfide reductase dsbd family protein | AFIC_002852 | Not Available | + | 2945193 - 2946032 | 29792.7 |
| peroxiredoxin | AFIC_002853 | Q69TY4 | + | 2946103 - 2946588 | 17206.8 |
| ribonuclease hi | AFIC_002854 | B6JJ39 | - | 2946639 - 2947094 | 16883.9 |
| homoserine kinase | AFIC_002855 | B6JJ40 | - | 2947091 - 2948071 | 35454.7 |
| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | AFIC_002856 | Q6N1Y1 | - | 2948206 - 2949195 | 35840.2 |
| duf1013 domain-containing protein | AFIC_002857 | Not Available | + | 2949482 - 2950186 | 26112.1 |
| pas domain-containing protein | AFIC_002858 | Q9I3S1 | - | 2950285 - 2951964 | 60910.3 |
| dsba family protein | AFIC_002859 | A1SHU2 | - | 2952394 - 2953068 | 24089.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
