Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycolate oxidase subunit glcf | AFIC_002810 | P52074 | - | 2902313 - 2903659 | 48363.9 |
| fad-binding protein | AFIC_002811 | P52073 | - | 2903656 - 2904900 | 42708.1 |
| fad-binding protein | AFIC_002812 | P0AEQ0 | - | 2904913 - 2906406 | 53568.1 |
| tetr/acrr family transcriptional regulator | AFIC_002813 | Q0S868 | - | 2906631 - 2907278 | 22260.1 |
| atp-dependent zinc metalloprotease ftsh | AFIC_002814 | A1URA3 | - | 2907480 - 2909396 | 69888.5 |
| trna lysidine(34) synthetase tils | AFIC_002815 | Q9XBG6 | - | 2909594 - 2910637 | 37550.7 |
| tol-pal system protein ybgf | AFIC_002816 | Not Available | - | 2910612 - 2911652 | 36923.9 |
| peptidoglycan-associated lipoprotein pal | AFIC_002817 | Q8U9L5 | - | 2911824 - 2912303 | 17383.6 |
| tol-pal system beta propeller repeat protein tolb | AFIC_002818 | Q1QHQ6 | - | 2912550 - 2913893 | 48640.6 |
| hypothetical protein | AFIC_002819 | Not Available | - | 2913930 - 2914871 | 34868.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
