Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ybjn domain-containing protein | AFIC_002740 | Not Available | + | 2832146 - 2832646 | 18407.0 |
| pyrroline-5-carboxylate reductase | AFIC_002741 | P22008 | + | 2832756 - 2833580 | 27724.8 |
| atp-binding protein | AFIC_002742 | P41406 | - | 2833584 - 2834972 | 51434.4 |
| response regulator transcription factor | AFIC_002743 | P31079 | - | 2834989 - 2835714 | 26660.1 |
| marr family transcriptional regulator | AFIC_002744 | P31078 | - | 2835711 - 2836235 | 19721.1 |
| hypothetical protein | AFIC_002745 | Not Available | - | 2836268 - 2836486 | 7924.3 |
| branched-chain amino acid aminotransferase | AFIC_002746 | A0R066 | + | 2836485 - 2837597 | 40194.0 |
| mate family efflux transporter | AFIC_002747 | Q98D15 | - | 2837633 - 2839042 | 50507.0 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | AFIC_002748 | Q89DG5 | - | 2839137 - 2840096 | 34837.9 |
| molybdenum cofactor biosynthesis protein moae | AFIC_002749 | Q984P0 | - | 2840096 - 2840569 | 17604.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
