Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | AFIC_002710 | O86459 | - | 2803839 - 2805041 | 43030.7 |
| phosphatase pap2 family protein | AFIC_002711 | Not Available | + | 2805323 - 2806387 | 37864.6 |
| glutathione s-transferase family protein | AFIC_002712 | Q52828 | + | 2806540 - 2807178 | 24217.2 |
| hypothetical protein | AFIC_002713 | Not Available | + | 2807332 - 2807499 | 5821.24 |
| hypothetical protein | AFIC_002714 | Not Available | + | 2807532 - 2807738 | 7106.0 |
| dmt family protein | AFIC_002715 | Not Available | - | 2807678 - 2808028 | 13034.2 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | AFIC_002716 | Q2YQS9 | + | 2808281 - 2809084 | 28898.5 |
| duf1501 domain-containing protein | AFIC_002717 | Not Available | - | 2809081 - 2810316 | 43252.8 |
| duf1800 family protein | AFIC_002718 | Not Available | - | 2810320 - 2811798 | 53043.2 |
| glutathione s-transferase family protein | AFIC_002719 | P27457 | - | 2812116 - 2812808 | 26179.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
