Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_002690 | Not Available | - | 2783136 - 2783594 | 16844.0 |
| hypothetical protein | AFIC_002691 | Not Available | + | 2783930 - 2784148 | 7646.16 |
| formyltransferase family protein | AFIC_002692 | Q8K009 | - | 2784213 - 2784821 | 21413.8 |
| hypothetical protein | AFIC_002693 | Not Available | - | 2784818 - 2786356 | 55116.9 |
| adenylosuccinate synthase | AFIC_002694 | Q3SNC6 | - | 2786419 - 2787711 | 46679.0 |
| dmt family transporter | AFIC_002695 | O29740 | + | 2787946 - 2788869 | 33964.6 |
| hypothetical protein | AFIC_002696 | Not Available | - | 2788903 - 2789736 | 30371.8 |
| phosphoglycerate dehydrogenase | AFIC_002697 | P35136 | - | 2789938 - 2791527 | 56056.0 |
| phosphoserine transaminase | AFIC_002698 | P52878 | - | 2791664 - 2792836 | 41869.4 |
| eama family transporter | AFIC_002699 | Not Available | + | 2793019 - 2793849 | 28913.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
