Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | AFIC_002670 | O34660 | + | 2762486 - 2764015 | 55409.8 |
| carbon monoxide dehydrogenase subunit g | AFIC_002671 | Not Available | - | 2764183 - 2764632 | 15520.5 |
| abc transporter atp-binding protein | AFIC_002672 | P21630 | - | 2764660 - 2765370 | 26058.9 |
| abc transporter atp-binding protein | AFIC_002673 | P21629 | - | 2765357 - 2766112 | 27518.3 |
| branched-chain amino acid abc transporter permease | AFIC_002674 | P30296 | - | 2766109 - 2767125 | 36381.4 |
| branched-chain amino acid abc transporter permease | AFIC_002675 | P0AEX8 | - | 2767122 - 2768000 | 30579.2 |
| abc transporter substrate-binding protein | AFIC_002676 | Q2YLF8 | - | 2768014 - 2769264 | 44631.0 |
| xanthine dehydrogenase family protein molybdopterin-binding subunit | AFIC_002677 | D7REY3 | - | 2769302 - 2771677 | 85275.2 |
| (2fe-2s)-binding protein | AFIC_002678 | D7REY5 | - | 2771674 - 2772183 | 18370.1 |
| xanthine dehydrogenase family protein subunit m | AFIC_002679 | O87681 | - | 2772180 - 2773040 | 30481.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
