Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphoglycerate kinase | AFIC_002630 | Q98FJ1 | - | 2722538 - 2723746 | 42397.0 |
| type i glyceraldehyde-3-phosphate dehydrogenase | AFIC_002631 | P51009 | - | 2723746 - 2724753 | 35665.9 |
| transketolase | AFIC_002632 | P29277 | - | 2724753 - 2726771 | 71494.9 |
| phosphoribulokinase | AFIC_002633 | P37100 | - | 2726809 - 2727684 | 33063.5 |
| class 1 fructose-bisphosphatase | AFIC_002634 | Q8GKS1 | - | 2727702 - 2728739 | 36703.8 |
| lysr family transcriptional regulator | AFIC_002635 | P25545 | + | 2728869 - 2729807 | 33722.0 |
| tonb-dependent receptor | AFIC_002636 | Q8DD41 | - | 2729857 - 2732217 | 85281.2 |
| nickel-responsive transcriptional regulator nikr | AFIC_002637 | Q89WI8 | + | 2732408 - 2732863 | 16885.9 |
| sulfite exporter taue/safe family protein | AFIC_002638 | Q07404 | - | 2732904 - 2733602 | 24949.9 |
| hydrogenase nickel incorporation protein hypb | AFIC_002639 | P28155 | - | 2733633 - 2734325 | 24390.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
