Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acetyltransferase | AFIC_002620 | Not Available | - | 2712390 - 2713064 | 24758.4 |
| degt/dnrj/eryc1/strs family aminotransferase | AFIC_002621 | Q9ZGH4 | - | 2713065 - 2714192 | 41040.1 |
| class i sam-dependent methyltransferase | AFIC_002622 | Not Available | - | 2714473 - 2715228 | 28326.3 |
| putative sugar o-methyltransferase | AFIC_002623 | Not Available | - | 2715348 - 2716421 | 39615.1 |
| had-ia family hydrolase | AFIC_002624 | Q9A5Z2 | - | 2717037 - 2717696 | 23384.9 |
| ribulose-phosphate 3-epimerase | AFIC_002625 | P51012 | - | 2717731 - 2718420 | 24155.2 |
| cbbx protein | AFIC_002626 | P95648 | - | 2718451 - 2719383 | 34849.9 |
| ribulose bisphosphate carboxylase small subunit | AFIC_002627 | Q9ZI33 | - | 2719532 - 2719951 | 16209.0 |
| form i ribulose bisphosphate carboxylase large subunit | AFIC_002628 | A5EQ63 | - | 2719964 - 2721424 | 54150.7 |
| fructose-bisphosphate aldolase class ii | AFIC_002629 | P29271 | - | 2721455 - 2722537 | 39297.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
