Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_002610 | Not Available | + | 2702089 - 2702337 | 8722.39 |
| duf2189 domain-containing protein | AFIC_002611 | Not Available | + | 2702349 - 2703158 | 28842.6 |
| heavy metal translocating p-type atpase | AFIC_002612 | P18398 | + | 2703244 - 2705493 | 78920.6 |
| cbb3-type cytochrome oxidase assembly protein ccos | AFIC_002613 | P18399 | + | 2705493 - 2705645 | 5378.56 |
| fdta/qdta family cupin domain-containing protein | AFIC_002614 | Q6T1W8 | - | 2705860 - 2706285 | 15690.4 |
| hypothetical protein | AFIC_002615 | Not Available | - | 2706315 - 2708060 | 66168.9 |
| glycosyltransferase family 4 protein | AFIC_002616 | Not Available | - | 2708065 - 2709621 | 57619.8 |
| phytanoyl-coa dioxygenase family protein | AFIC_002617 | P9WI90 | - | 2709637 - 2710473 | 31633.6 |
| gnat family n-acetyltransferase | AFIC_002618 | Not Available | - | 2710466 - 2711452 | 37128.2 |
| glycoside hydrolase | AFIC_002619 | P9WLW6 | - | 2711452 - 2712213 | 28270.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
