Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf1134 domain-containing protein | AFIC_002590 | Not Available | + | 2684182 - 2684754 | 20169.2 |
| hypothetical protein | AFIC_002591 | Not Available | + | 2684873 - 2686030 | 42280.3 |
| Trna-val | Not Available | Not Available | + | 2686127 - 2686201 | Not Available |
| l,d-transpeptidase | AFIC_002593 | P39176 | + | 2686324 - 2686926 | 22154.7 |
| duf2927 domain-containing protein | AFIC_002594 | Not Available | + | 2686929 - 2687723 | 29736.5 |
| pas domain-containing methyl-accepting chemotaxis protein | AFIC_002595 | Q9I3S1 | - | 2687734 - 2689218 | 53131.6 |
| uroporphyrinogen decarboxylase | AFIC_002596 | Q1QJ95 | + | 2689458 - 2690504 | 38171.0 |
| hydroxymethylbilane synthase | AFIC_002597 | B4SJT8 | - | 2690501 - 2691490 | 35352.6 |
| glycosyltransferase family 4 protein | AFIC_002598 | P25740 | + | 2691648 - 2692727 | 38955.0 |
| ferredoxin family protein | AFIC_002599 | Q45972 | + | 2692994 - 2693335 | 12850.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
