Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_002570 | Not Available | + | 2665888 - 2666187 | 11498.9 |
| hypothetical protein | AFIC_002571 | Not Available | - | 2666193 - 2666567 | 14155.8 |
| res family nad+ phosphorylase | AFIC_002572 | P55588 | - | 2666706 - 2667389 | 25624.2 |
| mbca/pars/xre antitoxin family protein | AFIC_002573 | P55587 | - | 2667389 - 2667775 | 14360.4 |
| Trna-met | Not Available | Not Available | + | 2668069 - 2668144 | Not Available |
| flagellar biosynthesis protein flha | AFIC_002575 | Q03845 | + | 2668409 - 2670625 | 78512.3 |
| hypothetical protein | AFIC_002576 | Not Available | + | 2670938 - 2671150 | 7292.98 |
| anti-sigma factor | AFIC_002577 | Not Available | - | 2671322 - 2672305 | 33664.2 |
| sigma-70 family rna polymerase sigma factor | AFIC_002578 | A3Q5U0 | - | 2672305 - 2672850 | 20249.5 |
| flagellar export protein flij | AFIC_002579 | Not Available | - | 2673020 - 2673439 | 16158.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
