Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fmn-dependent l-lactate dehydrogenase lldd | AFIC_002520 | C3K053 | + | 2615095 - 2616243 | 41889.9 |
| amidase | AFIC_002521 | Q39ZK0 | - | 2616277 - 2617503 | 44151.5 |
| sdr family oxidoreductase | AFIC_002522 | Q9KJF1 | - | 2617926 - 2618687 | 26428.8 |
| quinone oxidoreductase | AFIC_002523 | Q59I44 | - | 2618711 - 2619700 | 35191.6 |
| sulfite exporter taue/safe family protein | AFIC_002524 | Q0K020 | - | 2619715 - 2620455 | 25409.0 |
| glutathione s-transferase n-terminal domain-containing protein | AFIC_002525 | P0ACA8 | - | 2620468 - 2621085 | 22079.5 |
| rieske 2fe-2s domain-containing protein | AFIC_002526 | Q9ZET5 | - | 2621131 - 2621451 | 11841.1 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | AFIC_002527 | Q9X406 | - | 2621435 - 2622484 | 37870.8 |
| rieske 2fe-2s domain-containing protein | AFIC_002528 | Q96NN9 | - | 2622481 - 2622846 | 13236.9 |
| amidohydrolase | AFIC_002529 | Q0SFL6 | - | 2622850 - 2623923 | 40662.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
