Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | AFIC_002510 | Q980A9 | - | 2604322 - 2605836 | 55065.1 |
| phosphonate abc transporter atp-binding protein | AFIC_002511 | Q8YK28 | - | 2605847 - 2606596 | 26663.0 |
| phosphonate abc transporter, permease protein phne | AFIC_002512 | O69062 | - | 2606674 - 2607492 | 29498.4 |
| phosphate/phosphite/phosphonate abc transporter substrate-binding protein | AFIC_002513 | O69061 | - | 2607563 - 2608447 | 31704.1 |
| hypothetical protein | AFIC_002514 | Not Available | - | 2608492 - 2610618 | 75993.2 |
| dsre family protein | AFIC_002515 | Q58170 | - | 2610685 - 2611047 | 12716.3 |
| sulfurtransferase tusa family protein | AFIC_002516 | Q4ZVE8 | - | 2611114 - 2611356 | 9298.11 |
| hypothetical protein | AFIC_002517 | Not Available | - | 2611972 - 2612160 | 7042.37 |
| 2-dehydropantoate 2-reductase | AFIC_002518 | Not Available | - | 2612229 - 2613299 | 39186.6 |
| aminotransferase class v-fold plp-dependent enzyme | AFIC_002519 | P55819 | - | 2613369 - 2614496 | 40063.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
