Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| aec family transporter | AFIC_002480 | P56949 | - | 2570557 - 2571492 | 32872.5 |
| mfs transporter | AFIC_002481 | P37498 | + | 2571727 - 2572971 | 43490.5 |
| ggdef domain-containing protein | AFIC_002482 | A0A0H3AFM6 | - | 2573085 - 2574296 | 44047.3 |
| hypothetical protein | AFIC_002483 | Not Available | - | 2574476 - 2576407 | 70513.6 |
| 2-dehydropantoate 2-reductase | AFIC_002484 | Q987N5 | - | 2576677 - 2577690 | 37012.7 |
| abc transporter substrate-binding protein | AFIC_002485 | Not Available | + | 2577983 - 2579311 | 48121.0 |
| abc transporter permease | AFIC_002486 | P0AFL2 | - | 2579308 - 2580105 | 28396.4 |
| abc transporter permease | AFIC_002487 | P45170 | - | 2580102 - 2580980 | 31257.3 |
| abc transporter atp-binding protein | AFIC_002488 | A1TAI4 | - | 2580977 - 2582080 | 39630.8 |
| abc transporter substrate-binding protein | AFIC_002489 | P0AFK9 | - | 2582080 - 2583168 | 39056.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
