Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent succinate-semialdehyde dehydrogenase | AFIC_002470 | Q1JUP4 | - | 2560924 - 2562357 | 50900.3 |
| hypothetical protein | AFIC_002471 | Not Available | + | 2562745 - 2563098 | 13503.7 |
| hypothetical protein | AFIC_002472 | Not Available | - | 2563110 - 2563349 | 8721.56 |
| nipsnap family protein | AFIC_002473 | Q54I58 | - | 2563514 - 2563831 | 12436.1 |
| methylisocitrate lyase | AFIC_002474 | P54528 | - | 2563898 - 2564812 | 32776.7 |
| 2-methylcitrate synthase | AFIC_002475 | Q937N9 | - | 2564822 - 2566009 | 43164.7 |
| mmge/prpd family protein | AFIC_002476 | Q8NSL3 | - | 2566108 - 2567619 | 54994.3 |
| acyl-coa thioesterase | AFIC_002477 | P49851 | - | 2567650 - 2568069 | 15043.0 |
| lysr family transcriptional regulator | AFIC_002478 | Q9X725 | - | 2568370 - 2569269 | 33101.4 |
| alpha/beta hydrolase | AFIC_002479 | Q6NAM1 | + | 2569558 - 2570469 | 33691.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
