Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-alpha-glucanotransferase | AFIC_002460 | P15977 | - | 2542558 - 2544483 | 70940.9 |
| alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase | AFIC_002461 | Q2RTZ1 | + | 2544628 - 2546613 | 74442.1 |
| maltose alpha-d-glucosyltransferase | AFIC_002462 | A0R6E0 | + | 2546632 - 2549910 | 124968.0 |
| 1,4-alpha-glucan branching protein glgb | AFIC_002463 | Q133N2 | + | 2549907 - 2552054 | 81148.8 |
| glycogen debranching protein glgx | AFIC_002464 | P0A4Y5 | + | 2552054 - 2554126 | 76738.8 |
| malto-oligosyltrehalose trehalohydrolase | AFIC_002465 | Q9RX51 | + | 2554123 - 2555868 | 64681.0 |
| malto-oligosyltrehalose synthase | AFIC_002466 | Q44315 | + | 2555882 - 2558668 | 103766.0 |
| polyhydroxyalkanoic acid system family protein | AFIC_002467 | Not Available | + | 2558865 - 2559176 | 11417.0 |
| hypothetical protein | AFIC_002468 | Not Available | - | 2559231 - 2559563 | 11799.4 |
| molybdopterin-dependent oxidoreductase | AFIC_002469 | Q60HD0 | - | 2559575 - 2560783 | 43541.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
