Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-mercaptopyruvate sulfurtransferase | AFIC_002450 | O64530 | - | 2534871 - 2535719 | 30685.6 |
| rhodanese-like domain-containing protein | AFIC_002451 | B6ENU6 | - | 2535729 - 2536145 | 15455.6 |
| vwa domain-containing protein | AFIC_002452 | Not Available | - | 2536159 - 2537343 | 45905.6 |
| moxr family atpase | AFIC_002453 | O27092 | + | 2537517 - 2538359 | 32241.0 |
| giy-yig nuclease family protein | AFIC_002454 | Q9HN31 | - | 2538366 - 2538641 | 10318.3 |
| hypothetical protein | AFIC_002455 | Not Available | - | 2538641 - 2538976 | 11948.6 |
| duf2188 domain-containing protein | AFIC_002456 | Not Available | + | 2539314 - 2539556 | 8932.05 |
| adenylate/guanylate cyclase domain-containing protein | AFIC_002457 | P40138 | - | 2539578 - 2541149 | 57652.3 |
| dienelactone hydrolase family protein | AFIC_002458 | P71505 | - | 2541223 - 2542110 | 31545.7 |
| duf3309 family protein | AFIC_002459 | Not Available | - | 2542295 - 2542459 | 5422.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
