Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fis family transcriptional regulator | AFIC_002430 | P17899 | + | 2516734 - 2516988 | 9111.86 |
| hypothetical protein | AFIC_002431 | Not Available | - | 2517013 - 2517444 | 15997.3 |
| alpha/beta fold hydrolase | AFIC_002432 | Q5UY71 | + | 2517671 - 2518726 | 37831.2 |
| duf1275 domain-containing protein | AFIC_002433 | O34343 | + | 2518899 - 2519579 | 24053.2 |
| hypothetical protein | AFIC_002434 | Not Available | + | 2519653 - 2520243 | 20794.7 |
| bacterioferritin | AFIC_002435 | Q59738 | - | 2520278 - 2520778 | 19293.9 |
| (2fe-2s)-binding protein | AFIC_002436 | O68934 | - | 2520905 - 2521186 | 9616.56 |
| hypothetical protein | AFIC_002437 | Not Available | + | 2521575 - 2521889 | 11276.8 |
| chloride channel protein | AFIC_002438 | B2K549 | + | 2522105 - 2523433 | 45808.7 |
| hypothetical protein | AFIC_002439 | Not Available | + | 2523691 - 2524014 | 10780.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
