Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_002420 | Not Available | - | 2507642 - 2507842 | 7395.83 |
| glycine oxidase thio | AFIC_002421 | O34292 | + | 2508746 - 2509807 | 38899.2 |
| sulfur carrier protein this | AFIC_002422 | Q2W3R9 | + | 2509798 - 2509995 | 7354.7 |
| thiazole synthase | AFIC_002423 | Q3SPS2 | + | 2509995 - 2510789 | 28371.4 |
| thiamine phosphate synthase | AFIC_002424 | O34294 | + | 2510776 - 2511384 | 21768.0 |
| phosphomethylpyrimidine synthase thic | AFIC_002425 | B6JI86 | + | 2511561 - 2513471 | 70086.0 |
| dtdp-4-dehydrorhamnose 3,5-epimerase family protein | AFIC_002426 | Q7WY56 | + | 2513680 - 2514237 | 20671.9 |
| glycosyltransferase family 2 protein | AFIC_002427 | P39621 | + | 2514230 - 2515480 | 46587.5 |
| class i sam-dependent methyltransferase | AFIC_002428 | Q72HI4 | + | 2515540 - 2516157 | 22828.0 |
| hypothetical protein | AFIC_002429 | Not Available | + | 2516173 - 2516373 | 7505.77 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
