Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zinc metallochaperone gtpase ziga | AFIC_002410 | P94400 | + | 2498382 - 2499596 | 45857.3 |
| n-acetyltransferase | AFIC_002411 | P63419 | - | 2499600 - 2500112 | 18651.8 |
| nudix domain-containing protein | AFIC_002412 | P46351 | - | 2500180 - 2500665 | 18253.9 |
| hypothetical protein | AFIC_002413 | Not Available | + | 2500779 - 2501735 | 34916.3 |
| metallophosphoesterase | AFIC_002414 | P05675 | + | 2501737 - 2502633 | 32539.9 |
| hypothetical protein | AFIC_002415 | Not Available | - | 2502630 - 2503217 | 21197.7 |
| hypothetical protein | AFIC_002416 | Not Available | - | 2503396 - 2503602 | 7719.01 |
| isocitrate lyase | AFIC_002417 | Q9I0K4 | - | 2503638 - 2505278 | 60691.0 |
| short-chain fatty acyl-coa regulator family protein | AFIC_002418 | P9WMI0 | + | 2505459 - 2506916 | 55270.0 |
| duf1993 domain-containing protein | AFIC_002419 | Not Available | + | 2507062 - 2507565 | 18291.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
