Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycine--trna ligase subunit beta | AFIC_002350 | A5EED4 | - | 2432529 - 2434811 | 83841.0 |
| duf559 domain-containing protein | AFIC_002351 | P45736 | - | 2434817 - 2435215 | 14958.7 |
| cytochrome ubiquinol oxidase subunit i | AFIC_002352 | B6JEV8 | - | 2435352 - 2436236 | 33643.9 |
| hypothetical protein | AFIC_002353 | Not Available | - | 2436392 - 2436583 | 6973.45 |
| s49 family peptidase | AFIC_002354 | Q2YMB3 | - | 2436597 - 2437478 | 31722.4 |
| methyltransferase | AFIC_002355 | P37543 | - | 2437721 - 2438524 | 28043.6 |
| duf2007 domain-containing protein | AFIC_002356 | Not Available | - | 2438514 - 2438729 | 7525.14 |
| polyprenyl synthetase family protein | AFIC_002357 | P0AD57 | + | 2438834 - 2439844 | 36057.5 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | AFIC_002358 | Q6NAZ1 | - | 2439854 - 2440735 | 30032.2 |
| tetratricopeptide repeat protein | AFIC_002359 | Not Available | - | 2440853 - 2442652 | 65539.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
