Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | AFIC_000178 | Q54YZ9 | + | 193579 - 195810 | 81734.8 |
| gnat family n-acetyltransferase | AFIC_000179 | Q2YNY9 | + | 195935 - 196897 | 35910.5 |
| type i pantothenate kinase | AFIC_000180 | B6JCG7 | - | 196901 - 197857 | 36444.9 |
| phosphoribosyl-atp diphosphatase | AFIC_000181 | P60538 | - | 197938 - 198267 | 11700.0 |
| imidazole glycerol phosphate synthase subunit hisf | AFIC_000182 | B6JCG5 | - | 198354 - 199130 | 27653.1 |
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | AFIC_000183 | B6JCG4 | - | 199131 - 199868 | 25570.1 |
| imidazole glycerol phosphate synthase subunit hish | AFIC_000184 | Q89WM6 | - | 199865 - 200515 | 23652.5 |
| duf2628 domain-containing protein | AFIC_000185 | Not Available | - | 200512 - 201003 | 18255.2 |
| imidazoleglycerol-phosphate dehydratase hisb | AFIC_000186 | B6JAL6 | - | 201032 - 201625 | 21389.7 |
| atp-dependent protease subunit hslv | AFIC_000187 | B6JAL5 | + | 201820 - 202371 | 19581.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
