Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate reductase | AFIC_000158 | B6JCI8 | - | 173797 - 174600 | 27692.2 |
| orotidine-5'-phosphate decarboxylase | AFIC_000159 | B6JCI7 | - | 174697 - 175404 | 24163.3 |
| nad(p)h-dependent oxidoreductase | AFIC_000160 | Not Available | - | 175414 - 175986 | 20617.1 |
| class i sam-dependent methyltransferase | AFIC_000161 | P55465 | - | 176054 - 176833 | 29303.7 |
| hypothetical protein | AFIC_000162 | L0D9B6 | - | 176969 - 177565 | 21874.3 |
| molecular chaperone dnaj | AFIC_000163 | Q6NCY3 | - | 177663 - 178793 | 40308.7 |
| molecular chaperone dnak | AFIC_000164 | B6JCI3 | - | 178895 - 180808 | 68516.4 |
| hypothetical protein | AFIC_000165 | Not Available | + | 181109 - 182074 | 34240.9 |
| nucleotide exchange factor grpe | AFIC_000166 | B6JCI1 | - | 182087 - 182686 | 21722.8 |
| heat-inducible transcriptional repressor hrca | AFIC_000167 | B6JCI0 | - | 182775 - 183866 | 39284.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
