Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_001487 | Not Available | + | 1504926 - 1505126 | 7318.81 |
| serine hydroxymethyltransferase | AFIC_001488 | B6JGH9 | + | 1505656 - 1506957 | 46573.7 |
| transcriptional regulator nrdr | AFIC_001489 | Q07MT8 | + | 1506982 - 1507458 | 18176.8 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | AFIC_001490 | P17618 | + | 1507455 - 1508585 | 39491.4 |
| riboflavin synthase | AFIC_001491 | Q2YN92 | + | 1508599 - 1509207 | 21687.1 |
| 6,7-dimethyl-8-ribityllumazine synthase | AFIC_001492 | B6JGI3 | + | 1509326 - 1509817 | 17520.1 |
| transcription antitermination factor nusb | AFIC_001493 | Q2IWR9 | + | 1509814 - 1510317 | 18353.8 |
| thiamine-phosphate kinase | AFIC_001494 | Q9A8J2 | + | 1510321 - 1511292 | 33247.1 |
| sodium-translocating pyrophosphatase | AFIC_001495 | P60363 | + | 1511497 - 1513617 | 72009.9 |
| hypothetical protein | AFIC_001496 | Not Available | + | 1513835 - 1513987 | 5753.56 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
