Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_001477 | Not Available | - | 1495261 - 1495515 | 9608.68 |
| dna topoisomerase iv subunit a | AFIC_001478 | Q59749 | + | 1495722 - 1497977 | 83597.6 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | AFIC_001479 | O52278 | + | 1498120 - 1498710 | 21890.4 |
| nramp family divalent metal transporter | AFIC_001480 | Q8UEM1 | + | 1498762 - 1500129 | 48023.4 |
| arginyltransferase | AFIC_001481 | B6JGH2 | - | 1500138 - 1500914 | 28964.5 |
| rdd family protein | AFIC_001482 | Not Available | - | 1501010 - 1501546 | 19488.1 |
| porphobilinogen synthase | AFIC_001483 | P45622 | - | 1501652 - 1502719 | 38877.7 |
| duf6163 family protein | AFIC_001484 | Not Available | + | 1502829 - 1503320 | 17871.9 |
| marr family winged helix-turn-helix transcriptional regulator | AFIC_001485 | P96440 | + | 1503664 - 1504176 | 19527.5 |
| hypothetical protein | AFIC_001486 | Not Available | + | 1504375 - 1504878 | 18261.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
