Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_001457 | Q9M8Y0 | - | 1476323 - 1477264 | 34216.9 |
| Trna-ser | Not Available | Not Available | + | 1477357 - 1477448 | Not Available |
| porin | AFIC_001459 | Q44665 | + | 1478050 - 1479453 | 48859.1 |
| alpha/beta hydrolase | AFIC_001460 | Q988D4 | - | 1479604 - 1480494 | 31895.5 |
| transglycosylase slt domain-containing protein | AFIC_001461 | P39434 | - | 1480703 - 1482892 | 79638.0 |
| 4-hydroxy-tetrahydrodipicolinate synthase | AFIC_001462 | Q07M65 | + | 1483168 - 1484061 | 31498.2 |
| large conductance mechanosensitive channel protein mscl | AFIC_001463 | B6JGA5 | + | 1484113 - 1484526 | 14821.5 |
| ssra-binding protein smpb | AFIC_001464 | B6JGA6 | + | 1484551 - 1485024 | 18241.2 |
| peroxiredoxin | AFIC_001465 | P0C5D4 | + | 1485027 - 1485602 | 20449.5 |
| uracil-dna glycosylase | AFIC_001466 | Q5SJ65 | - | 1485599 - 1486303 | 25637.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
