Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gata | AFIC_001446 | B6JFW2 | + | 1462152 - 1463627 | 52411.6 |
| hypothetical protein | AFIC_001447 | Not Available | + | 1463627 - 1463920 | 10584.2 |
| chorismate mutase | AFIC_001448 | P07023 | + | 1463920 - 1464216 | 11081.3 |
| patatin-like phospholipase family protein | AFIC_001449 | Not Available | + | 1464316 - 1465707 | 49400.8 |
| asp-trna(asn)/glu-trna(gln) amidotransferase subunit gatb | AFIC_001450 | B6JFW6 | + | 1465760 - 1467244 | 53779.1 |
| hypothetical protein | AFIC_001451 | Not Available | + | 1468535 - 1468801 | 9678.63 |
| selenocysteine-specific translation elongation factor | AFIC_001453 | Q46455 | + | 1469370 - 1471169 | 63791.7 |
| 2fe-2s iron-sulfur cluster-binding protein | AFIC_001454 | P56914 | - | 1471260 - 1472210 | 34571.8 |
| nad(p)h-dependent oxidoreductase subunit e | AFIC_001455 | O66841 | - | 1472207 - 1474066 | 66525.8 |
| cytochrome ubiquinol oxidase subunit i | AFIC_001456 | Not Available | - | 1474079 - 1476141 | 74959.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
