Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l33 | AFIC_001426 | Q89K02 | - | 1443019 - 1443186 | 6290.84 |
| hypothetical protein | AFIC_001427 | Not Available | - | 1443373 - 1444173 | 28316.9 |
| nudix domain-containing protein | AFIC_001428 | Not Available | - | 1444239 - 1444979 | 26682.3 |
| duf983 domain-containing protein | AFIC_001429 | Not Available | - | 1444997 - 1445455 | 16764.5 |
| ribonuclease r | AFIC_001430 | P40611 | - | 1445455 - 1447800 | 85872.4 |
| type i dna topoisomerase | AFIC_001431 | Q1RIM1 | - | 1447800 - 1450547 | 100197.0 |
| hypothetical protein | AFIC_001432 | Not Available | + | 1450779 - 1450994 | 8057.48 |
| dna-processing protein dpra | AFIC_001433 | P30852 | - | 1451005 - 1452126 | 39378.4 |
| glycerol-3-phosphate 1-o-acyltransferase plsy | AFIC_001434 | Q1QL21 | - | 1452202 - 1452804 | 20889.2 |
| dihydroorotase | AFIC_001435 | Q3A449 | - | 1452809 - 1454110 | 45780.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
