Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lytic transglycosylase domain-containing protein | AFIC_001416 | O31608 | + | 1433672 - 1434625 | 34504.2 |
| gnat family n-acetyltransferase | AFIC_001417 | Not Available | - | 1434630 - 1435796 | 43827.6 |
| glycerophosphodiester phosphodiesterase family protein | AFIC_001418 | Not Available | - | 1435861 - 1436628 | 28779.5 |
| rida family protein | AFIC_001419 | O96876 | - | 1436628 - 1437095 | 16220.7 |
| cell envelope integrity eipb family protein | AFIC_001420 | Q2YRJ0 | + | 1437213 - 1438073 | 31104.3 |
| dna polymerase iv | AFIC_001421 | Q92QM8 | - | 1438081 - 1439388 | 48037.9 |
| duf3572 domain-containing protein | AFIC_001422 | Not Available | - | 1439420 - 1439710 | 10025.8 |
| response regulator | AFIC_001423 | A6X580 | + | 1439835 - 1440200 | 13616.5 |
| pled family two-component system response regulator | AFIC_001424 | Q9A5I5 | + | 1440212 - 1441588 | 51177.6 |
| nicotinate phosphoribosyltransferase | AFIC_001425 | A4YK54 | + | 1441651 - 1442955 | 49531.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
