Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase | AFIC_001396 | Not Available | - | 1414403 - 1415074 | 24822.6 |
| polysaccharide deacetylase family protein | AFIC_001397 | Q8DP63 | - | 1415200 - 1416282 | 39139.1 |
| polysaccharide deacetylase family protein | AFIC_001398 | Q8DP63 | - | 1416345 - 1417136 | 28093.1 |
| helix-turn-helix domain-containing protein | AFIC_001399 | Not Available | + | 1417357 - 1417674 | 11326.8 |
| aldo/keto reductase | AFIC_001400 | Q8ZRM7 | + | 1417744 - 1418559 | 30351.6 |
| ydcf family protein | AFIC_001401 | P0AB02 | + | 1418619 - 1419413 | 28788.0 |
| duf3253 domain-containing protein | AFIC_001402 | Not Available | - | 1419419 - 1419706 | 9968.94 |
| glutathione s-transferase family protein | AFIC_001403 | Q18938 | + | 1419818 - 1420474 | 24290.1 |
| hypothetical protein | AFIC_001404 | Not Available | + | 1420742 - 1420933 | 6988.14 |
| hypothetical protein | AFIC_001405 | Not Available | + | 1421070 - 1421948 | 29899.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
