Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate synthase family protein | AFIC_001366 | Q1JUQ0 | + | 1388215 - 1389144 | 33279.2 |
| duf3606 domain-containing protein | AFIC_001367 | Not Available | - | 1389160 - 1389357 | 6915.26 |
| mfs transporter | AFIC_001368 | P16482 | - | 1389482 - 1390774 | 46343.7 |
| Trna-arg | Not Available | Not Available | + | 1390955 - 1391031 | Not Available |
| tripartite tricarboxylate transporter substrate-binding protein | AFIC_001370 | O34439 | + | 1391217 - 1392203 | 33943.2 |
| tripartite tricarboxylate transporter tctb family protein | AFIC_001371 | Not Available | + | 1392200 - 1392700 | 17141.5 |
| tripartite tricarboxylate transporter permease | AFIC_001372 | P70795 | + | 1392724 - 1394223 | 52095.7 |
| pilz domain-containing protein | AFIC_001373 | Not Available | - | 1394243 - 1394512 | 9798.15 |
| hypothetical protein | AFIC_001374 | Not Available | + | 1394791 - 1395237 | 16322.8 |
| mlic family protein | AFIC_001375 | P65319 | - | 1395244 - 1395888 | 22700.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
