Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cytochrome ubiquinol oxidase subunit i | AFIC_001326 | B6JET3 | + | 1360949 - 1361575 | 22310.1 |
| 50s ribosomal protein l4 | AFIC_001327 | B6JET4 | + | 1361680 - 1362300 | 22321.2 |
| 50s ribosomal protein l23 | AFIC_001328 | Q211F0 | + | 1362297 - 1362596 | 10926.2 |
| 50s ribosomal protein l2 | AFIC_001329 | B6JET6 | + | 1362608 - 1363444 | 30568.2 |
| 30s ribosomal protein s19 | AFIC_001330 | Q89J88 | + | 1363457 - 1363735 | 10204.3 |
| 50s ribosomal protein l22 | AFIC_001331 | Q211F3 | + | 1363746 - 1364132 | 14020.1 |
| 30s ribosomal protein s3 | AFIC_001332 | B6JET9 | + | 1364151 - 1364855 | 26245.1 |
| 50s ribosomal protein l16 | AFIC_001333 | B6JEU0 | + | 1364941 - 1365354 | 15210.0 |
| 50s ribosomal protein l29 | AFIC_001334 | Q07KM6 | + | 1365359 - 1365571 | 8112.82 |
| 30s ribosomal protein s17 | AFIC_001335 | Q07KM7 | + | 1365584 - 1365832 | 9677.63 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
