Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna-directed rna polymerase subunit beta' | AFIC_001316 | B6JES1 | + | 1344496 - 1348686 | 155020.0 |
| fad-dependent oxidoreductase | AFIC_001317 | P35903 | + | 1348982 - 1351036 | 76761.4 |
| abc transporter atp-binding protein/permease | AFIC_001318 | P54719 | + | 1351141 - 1353099 | 72094.3 |
| fkbm family methyltransferase | AFIC_001319 | Not Available | + | 1353441 - 1354418 | 35709.3 |
| hypothetical protein | AFIC_001320 | H8L902 | + | 1354415 - 1355602 | 43981.7 |
| 30s ribosomal protein s12 | AFIC_001321 | A5ELN2 | + | 1356286 - 1356657 | 13878.1 |
| 30s ribosomal protein s7 | AFIC_001322 | B6JES9 | + | 1356673 - 1357143 | 17726.2 |
| elongation factor g | AFIC_001323 | Q3SSW9 | + | 1357177 - 1359249 | 75741.8 |
| elongation factor tu | AFIC_001324 | B6JET1 | + | 1359289 - 1360479 | 43347.5 |
| 30s ribosomal protein s10 | AFIC_001325 | Q89J83 | + | 1360589 - 1360897 | 11669.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
