Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_001306 | Q2YKK7 | - | 1333139 - 1334842 | 62503.9 |
| Trna-trp | Not Available | Not Available | + | 1335004 - 1335079 | Not Available |
| serine/threonine protein phosphatase | AFIC_001308 | B7GLK2 | + | 1335221 - 1335955 | 26958.1 |
| preprotein translocase subunit sece | AFIC_001309 | P0AG98 | + | 1336225 - 1336416 | 7376.35 |
| transcription termination/antitermination protein nusg | AFIC_001310 | P65591 | + | 1336436 - 1336966 | 19962.0 |
| 50s ribosomal protein l11 | AFIC_001311 | A4YSH5 | + | 1337098 - 1337526 | 15324.9 |
| 50s ribosomal protein l1 | AFIC_001312 | B6JER6 | + | 1337533 - 1338225 | 23954.4 |
| 50s ribosomal protein l10 | AFIC_001313 | B6JER7 | + | 1338897 - 1339415 | 17520.5 |
| 50s ribosomal protein l7/l12 | AFIC_001314 | B6JER8 | + | 1339468 - 1339848 | 12844.6 |
| dna-directed rna polymerase subunit beta | AFIC_001315 | Q1QN44 | + | 1340217 - 1344353 | 153714.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
