Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysozyme inhibitor lpri family protein | AFIC_001296 | Not Available | - | 1327199 - 1327552 | 12627.2 |
| ggdef domain-containing protein | AFIC_001297 | Q9HT84 | - | 1327594 - 1328823 | 44482.2 |
| hypothetical protein | AFIC_001298 | Not Available | + | 1329208 - 1329639 | 15391.4 |
| hypothetical protein | AFIC_001299 | Not Available | + | 1329671 - 1330222 | 20254.8 |
| 23s rrna (guanosine(2251)-2'-o)-methyltransferase rlmb | AFIC_001300 | Q8Y016 | - | 1330382 - 1331200 | 29235.4 |
| Trna-tyr | Not Available | Not Available | + | 1331450 - 1331535 | Not Available |
| Trna-gly | Not Available | Not Available | + | 1331645 - 1331718 | Not Available |
| potassium channel family protein | AFIC_001303 | Q850M0 | - | 1331813 - 1332145 | 11966.7 |
| hypothetical protein | AFIC_001304 | Not Available | - | 1332314 - 1332601 | 9017.04 |
| glsb/yeaq/ymge family stress response membrane protein | AFIC_001305 | P64487 | + | 1332799 - 1333041 | 8330.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
