Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf2336 domain-containing protein | AFIC_001286 | Not Available | + | 1318754 - 1320175 | 50757.2 |
| hpt domain-containing protein | AFIC_001287 | Not Available | - | 1320260 - 1320844 | 21749.7 |
| response regulator | AFIC_001288 | Q93P00 | - | 1320850 - 1321395 | 20608.0 |
| nad kinase | AFIC_001289 | A7HWM6 | - | 1321497 - 1322276 | 28816.9 |
| hypothetical protein | AFIC_001290 | Not Available | + | 1322585 - 1322809 | 8289.43 |
| tonb-dependent receptor | AFIC_001291 | Q6CZB5 | - | 1322899 - 1324926 | 73406.9 |
| hypothetical protein | AFIC_001292 | Not Available | + | 1325509 - 1325913 | 14910.8 |
| tryptophan-rich sensory protein | AFIC_001293 | Q8KBX2 | + | 1325921 - 1326397 | 17265.6 |
| hypothetical protein | AFIC_001294 | Not Available | - | 1326657 - 1326857 | 7384.53 |
| Trna-thr | Not Available | Not Available | + | 1327023 - 1327097 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
