Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gdsl-type esterase/lipase family protein | AFIC_001266 | Q9HZY8 | + | 1297803 - 1298333 | 17966.6 |
| hypothetical protein | AFIC_001267 | Not Available | - | 1298350 - 1298979 | 22210.6 |
| pilz domain-containing protein | AFIC_001268 | Not Available | - | 1299131 - 1299745 | 23015.0 |
| pas domain-containing protein | AFIC_001269 | Not Available | - | 1299839 - 1300396 | 20246.4 |
| rhomboid family intramembrane serine protease | AFIC_001270 | A8GKU2 | + | 1300891 - 1301703 | 29253.0 |
| cbs domain-containing protein | AFIC_001271 | Q9LEV3 | + | 1301877 - 1302305 | 15926.5 |
| patatin-like phospholipase family protein | AFIC_001272 | P0AFR0 | - | 1302316 - 1303338 | 36078.6 |
| hypothetical protein | AFIC_001273 | Not Available | + | 1303549 - 1304598 | 36786.5 |
| eal domain-containing protein | AFIC_001274 | P55552 | + | 1304917 - 1307247 | 85458.2 |
| nitroreductase | AFIC_001275 | P0ACY2 | - | 1307254 - 1307817 | 20653.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
