Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| zinc-finger domain-containing protein | AFIC_001256 | Not Available | - | 1290163 - 1290408 | 8848.53 |
| hypothetical protein | AFIC_001257 | Not Available | + | 1290819 - 1291850 | 35873.4 |
| alpha/beta fold hydrolase | AFIC_001258 | Q59695 | + | 1291934 - 1292686 | 27069.3 |
| serine o-acetyltransferase | AFIC_001259 | P29847 | + | 1292783 - 1293607 | 29940.6 |
| duf3126 family protein | AFIC_001260 | Not Available | + | 1293717 - 1293935 | 8428.83 |
| hypothetical protein | AFIC_001261 | Not Available | - | 1294103 - 1294813 | 26016.1 |
| hypothetical protein | AFIC_001262 | Not Available | + | 1295033 - 1295362 | 11751.7 |
| gamma carbonic anhydrase family protein | AFIC_001263 | P40882 | + | 1295583 - 1296113 | 18631.5 |
| transglutaminase-like cysteine peptidase | AFIC_001264 | Not Available | - | 1296242 - 1296886 | 23542.8 |
| carboxymuconolactone decarboxylase family protein | AFIC_001265 | P08304 | + | 1297406 - 1297741 | 11899.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
