Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-e domain-containing protein | AFIC_001246 | Not Available | - | 1280021 - 1280971 | 36550.3 |
| circularly permuted type 2 atp-grasp protein | AFIC_001247 | Q55587 | - | 1280983 - 1282398 | 52439.8 |
| competence/damage-inducible protein a | AFIC_001248 | Q9YAF9 | + | 1282604 - 1283350 | 26512.8 |
| xanthine phosphoribosyltransferase | AFIC_001249 | Q138L1 | + | 1283483 - 1283986 | 18025.8 |
| glycosyltransferase family 39 protein | AFIC_001250 | Not Available | - | 1284004 - 1286073 | 76192.1 |
| Trna-leu | Not Available | Not Available | + | 1286433 - 1286519 | Not Available |
| pas domain-containing protein | AFIC_001252 | Q2NCA3 | - | 1286561 - 1287595 | 36745.1 |
| gnat family n-acetyltransferase | AFIC_001253 | P40586 | + | 1287876 - 1288463 | 21484.9 |
| hypothetical protein | AFIC_001254 | Not Available | + | 1288587 - 1288970 | 14008.8 |
| fad-dependent monooxygenase | AFIC_001255 | Q5EXK1 | - | 1288975 - 1290156 | 43253.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
