Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| reverse transcriptase family protein | AFIC_001236 | P23070 | + | 1271834 - 1272877 | 40363.9 |
| hypothetical protein | AFIC_001237 | Not Available | - | 1272979 - 1273137 | 5740.01 |
| chaperonin groel | AFIC_001238 | Q3SQJ5 | - | 1273211 - 1274851 | 57866.9 |
| co-chaperone groes | AFIC_001239 | P60367 | - | 1274885 - 1275199 | 11135.7 |
| vit1/ccc1 transporter family protein | AFIC_001240 | Q9ZUA5 | + | 1275448 - 1276143 | 24355.7 |
| usg protein | AFIC_001241 | P12288 | + | 1276381 - 1276680 | 11347.6 |
| pas domain-containing protein | AFIC_001242 | Not Available | + | 1276894 - 1277430 | 19787.8 |
| sdr family oxidoreductase | AFIC_001243 | A7AZH2 | - | 1277462 - 1278214 | 26593.3 |
| peptidase | AFIC_001244 | A1RTI7 | - | 1278319 - 1279068 | 27385.1 |
| transglutaminase family protein | AFIC_001245 | Q49757 | - | 1279191 - 1280012 | 29755.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
