Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4189 domain-containing protein | AFIC_001226 | Not Available | + | 1264004 - 1264384 | 13154.1 |
| cellulose biosynthesis protein bcss | AFIC_001227 | Not Available | - | 1264388 - 1265137 | 27422.5 |
| duf488 domain-containing protein | AFIC_001228 | Not Available | - | 1265257 - 1265715 | 16957.5 |
| duf72 domain-containing protein | AFIC_001229 | O32135 | - | 1265729 - 1266535 | 29852.7 |
| hypothetical protein | AFIC_001230 | Not Available | + | 1266815 - 1267216 | 14750.3 |
| hypothetical protein | AFIC_001231 | Not Available | - | 1267288 - 1267536 | 8647.77 |
| acyltransferase | AFIC_001232 | P26502 | - | 1267708 - 1268796 | 39040.4 |
| transporter substrate-binding domain-containing protein | AFIC_001233 | Q21415 | + | 1269097 - 1270236 | 41470.6 |
| hypothetical protein | AFIC_001234 | Not Available | + | 1271351 - 1271485 | 5710.08 |
| helix-turn-helix transcriptional regulator | AFIC_001235 | Not Available | + | 1271482 - 1271844 | 13522.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
