Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | AFIC_001216 | P21630 | - | 1255464 - 1256195 | 26669.6 |
| abc transporter atp-binding protein | AFIC_001217 | P0A194 | - | 1256192 - 1257028 | 30528.1 |
| high-affinity branched-chain amino acid abc transporter permease livm | AFIC_001218 | P21628 | - | 1257025 - 1258305 | 46402.3 |
| branched-chain amino acid abc transporter permease | AFIC_001219 | P0AEX8 | - | 1258362 - 1259276 | 32654.2 |
| hypothetical protein | AFIC_001220 | Not Available | + | 1259507 - 1259635 | 4514.08 |
| hypothetical protein | AFIC_001221 | Not Available | + | 1259815 - 1260342 | 18891.3 |
| 3-oxoadipate enol-lactonase | AFIC_001222 | P00632 | - | 1260329 - 1261111 | 28149.9 |
| hypothetical protein | AFIC_001223 | P77183 | + | 1261286 - 1261624 | 11403.5 |
| xdhc family protein | AFIC_001224 | O32147 | + | 1261621 - 1262337 | 25912.4 |
| molybdopterin-binding/glycosyltransferase family 2 protein | AFIC_001225 | Q46810 | + | 1262334 - 1263941 | 56651.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
