Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ktsc domain-containing protein | AFIC_001206 | D5UU90 | - | 1247304 - 1247522 | 8580.07 |
| multicopper oxidase domain-containing protein | AFIC_001207 | Q02219 | - | 1247647 - 1248597 | 34132.6 |
| cytochrome c | AFIC_001208 | Not Available | - | 1248647 - 1249048 | 14327.4 |
| cytochrome c | AFIC_001209 | Not Available | - | 1249045 - 1249725 | 24277.2 |
| multicopper oxidase domain-containing protein | AFIC_001210 | Q96WM9 | - | 1249747 - 1250733 | 37125.1 |
| hypothetical protein | AFIC_001211 | Not Available | - | 1251056 - 1251691 | 22523.7 |
| p1 family peptidase | AFIC_001212 | P9WM22 | - | 1251800 - 1252801 | 33812.2 |
| cytochrome c biogenesis protein ccda | AFIC_001213 | Q9KDL8 | + | 1253094 - 1253828 | 25622.3 |
| branched-chain amino acid abc transporter substrate-binding protein | AFIC_001214 | Q8FYS6 | - | 1253860 - 1254972 | 39551.0 |
| hypothetical protein | AFIC_001215 | Not Available | - | 1255093 - 1255464 | 13842.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
