Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s4 | AFIC_001196 | B6JDU6 | - | 1239537 - 1240154 | 23538.4 |
| cupin domain-containing protein | AFIC_001197 | Not Available | - | 1240379 - 1240798 | 14254.5 |
| glutamate racemase | AFIC_001198 | A5VQW7 | - | 1240877 - 1241674 | 28620.5 |
| cytochrome b | AFIC_001199 | P75925 | + | 1241849 - 1242397 | 20745.4 |
| adenylosuccinate lyase | AFIC_001200 | P12047 | - | 1242434 - 1243741 | 48948.0 |
| ribulose-phosphate 3-epimerase | AFIC_001201 | P51012 | - | 1243800 - 1244501 | 24513.5 |
| hypothetical protein | AFIC_001202 | Not Available | - | 1244634 - 1245047 | 14600.9 |
| ef-hand domain-containing protein | AFIC_001203 | Not Available | + | 1245016 - 1245498 | 15638.5 |
| outer membrane beta-barrel protein | AFIC_001204 | Not Available | + | 1245626 - 1246822 | 43095.9 |
| hypothetical protein | AFIC_001205 | Not Available | - | 1246866 - 1247123 | 7820.76 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
