Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxydohydrogena |
| Strain | Z-1062 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pseudomonas carboxydohydrogena Z-1062
Accession NumberCP113162.1
Gene Summary
Adenine Count
614120 bp
Thymine Count
614391 bp
Guanine Count
1021703 bp
Cytosine Count
1021226 bp
Genome Length
3271440 bp
Protein-coding Genes
3090 genes
Non-Coding Genes
71 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | AFIC_001166 | Not Available | + | 1207433 - 1207594 | 5622.99 |
| flp family type ivb pilin | AFIC_001167 | Not Available | + | 1207769 - 1207930 | 5602.03 |
| fluoride efflux transporter crcb | AFIC_001168 | Q3SWD2 | + | 1208299 - 1208682 | 13322.6 |
| is1595 family transposase | AFIC_001169 | P04137 | + | 1208824 - 1209702 | 34281.4 |
| hypothetical protein | AFIC_001170 | Not Available | - | 1209732 - 1210571 | 31263.7 |
| recombinase reca | AFIC_001171 | Q9XBC1 | + | 1210852 - 1211895 | 37244.9 |
| aminomethyl-transferring glycine dehydrogenase | AFIC_001172 | Q89I86 | - | 1212247 - 1215099 | 102749.0 |
| glycine cleavage system protein gcvh | AFIC_001173 | Q89I87 | - | 1215167 - 1215532 | 12984.0 |
| glycine cleavage system aminomethyltransferase gcvt | AFIC_001174 | Q54DD3 | - | 1215552 - 1216703 | 40776.3 |
| alanine--trna ligase | AFIC_001175 | Q13AB9 | + | 1217135 - 1219801 | 95348.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
